Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805831.1_cds_XP_016494095.1_8538
CDS Infomation

[gene=LOC107813351] [db_xref=GeneID:107813351] [protein=eukaryotic translation initiation factor 3 subunit D-like] [partial=5'] [protein_id=XP_016494095.1] [location=complement(42084..>43466)] [gbkey=CDS]
Sequence

CACCACAACCGCTCTCAGCTTCCCCAGCGCCGCGACGAGGAAGTCGAGGCCCGAAAACGC
GAACAGGAGAAAGAAAGAGCTCGAAGGGACAGGCTGTACAATCTCAACCGTTCGGGAACA
AACGCTGGACAGAGAAGAGAATCTGCTGTGTTCAAATCATCAGTTGATATTCAACCTGAA
TGGAATATGCTCGATCAGATCCCGTTTTCAACTTTCTCCAAGCTTTCCTTCTCCGTTCCG
GAGCCTGAGGACTTGCTGATCTGCGGCAGCCTTGAGTTTTACGACCGGTCCTACGATCGG
ATTACTCCGAAGAATGAACGTCGTCTGGAGAGGTTTAAGAACAGGAATTTCTTCAAAGTT
ACTACTACGGATGATCCTGTTATCCGCCGTTTGGCTAATGAGGATAAAGCTACTGTTTTT
GCAACGGATACGATTTTGTCTACTTTAATGTGTGCTCCTAGGTCTGTTTACTCGTGGGAT
ATTGTAGTTCAGCGTGTTGGAAATAAGTTGTTTTTCGACAAGCGTGATGGGTCCCAGCTG
GATTTGCTCTCTGTTCATGAAACTTCCCAAGAACCATTGCCTGATGTGAAGGATGACATT
AATTCGGCTCATTCGTTGAGTGTTGAGGCTGCTTATATCAATCAGAATTTCTCGCAACAG
GTTCTGATAAGAGATGGGAAGAAGTTGAATTATGATGAGCCTAACCCGTTTGCGACTGAA
GGGGAAGAGGTGGCGTCCGTTGGTTACAGGTACAGGAGGTGGAAGTTGGATGATGATACC
TTTTTGGTGGCACGATGTGAAGTGCAGAGTGTGGTGGAAGTGAACAATCAGAGATCATTC
TTGACTCTGAATGCACTAAATGAGTTTGATCCTAAGTACTCTGGGGTTGATTGGAGGCAG
AAGCTTGAGACGCAAAGGGGTGCTGTGTTAGCTACCGAGTTGAAGAATAACGCAAATAAG
CTCGCGAAATGGACTGCACAAGCGTTGCTAGCTAATGCTGATATGATGAAGTTGGGTTAT
GTATCAAGAGTCCATCCTAGGGATCATTTTAACCATGTGATATTAGCTGTTGTTGGATAT
AAGCCTAAGGACTTTGCTGCACAAATCAATTTGAACACATCAAACATGTGGGGTATTGTG
AAAAGTATTGTGGACTTGTGTATGAAGTTGAATGAAGGGAAATATGTGCTTGTTAAGGAC
CCAACCAAGCCACAGGTTAGGATTTATGAGGTCCCTCCAGATGCATTTGAGAACGACTAT
GTTGAGGAGCCATTGCCAGAAGACGAACAAGTTCAGCCTCCTACAGAGGATGCGCAAGGT
GCTGAGGCAAATGGGGCTGCAAATGAAGTAGAGGACAAGGAGATTAGCACTGAAGCTGCA
TAA

Peptide Sequence

PEP ID

XP_016494095.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 3 subunit D-like, partial [Nicotiana tabacum]
Sequence

HHNRSQLPQRRDEEVEARKREQEKERARRDRLYNLNRSGTNAGQRRESAVFKSSVDIQPE
WNMLDQIPFSTFSKLSFSVPEPEDLLICGSLEFYDRSYDRITPKNERRLERFKNRNFFKV
TTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQL
DLLSVHETSQEPLPDVKDDINSAHSLSVEAAYINQNFSQQVLIRDGKKLNYDEPNPFATE
GEEVASVGYRYRRWKLDDDTFLVARCEVQSVVEVNNQRSFLTLNALNEFDPKYSGVDWRQ
KLETQRGAVLATELKNNANKLAKWTAQALLANADMMKLGYVSRVHPRDHFNHVILAVVGY
KPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPTKPQVRIYEVPPDAFENDY
VEEPLPEDEQVQPPTEDAQGAEANGAANEVEDKEISTEAA

Transcript Sequence

Gene sequence data has not been registered.